Search Results

You are looking at 1 - 2 of 2 items for :

  • "differential expression analysis" x
Clear All
Full access

Arvind Rao, Ganesh Rao, David A. Gutman, Adam E. Flanders, Scott N. Hwang, Daniel L. Rubin, Rivka R. Colen, Pascal O. Zinn, Rajan Jain, Max Wintermark, Justin S. Kirby, C. Carl Jaffe, John Freymann and TCGA Glioma Phenotype Research Group

smaller than FLAIR region). Hemorrhage represents intrinsic hemorrhage in the tumor matrix (observed in T1-weighted images or T2-weighted images). Genomic Features Level 3 expression data for both mRNA (Affymetrix U133Av2 BI Platform: Affymetrix HT HG U133A) and miRNA (UNC Agilent Human miRNA 8 × 15 K) were downloaded from the TCGA data portal. These data are normalized and were used for differential expression analysis. Survival Data Patient-specific survival data came from the cBioPortal for Cancer Genomics. Clinical data are available at http

Full access

Stanley S. Stylli, Alexios A. Adamides, Rachel M. Koldej, Rodney B. Luwor, David S. Ritchie, James Ziogas and Andrew H. Kaye

comparison groups that underwent Differential Expression Analysis with the nSolver Analysis software were as folllows: Comparison 1, no SAH versus SAH/no vasospasm (combined); Comparison 2, no SAH versus SAH/no vasospasm (Sample Day 1); Comparison 3, no SAH versus SAH/vasospasm (combined); Comparison 4, no SAH versus SAH/vasospasm (Sample Day 1); Comparison 5, no SAH versus SAH/vasospasm (post Sample Day 1); Comparison 6, SAH/no vasospasm (combined) versus SAH/vasospasm (combined); Comparison 7, SAH/no vasospasm (Sample Day 1) versus SAH/vasospasm (Sample Day 1); and